Difference between revisions of "Light microscopy"

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622 bytes added ,  15:53, 27 May 2011
+DOF section
(→‎Resolution: another ref.)
(+DOF section)
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==Resolution==
==Resolution==
<math>R = 1.22 * {gamma \over {NA_{obj} + NA_{cond}}}</math>.<ref name=pom>{{cite web |url=http://www.life.umd.edu/CBMG/faculty/wolniak/wolniakmicro.html |title=Principles of Microscopy  |author= |date= |work= |publisher= |accessdate=21 January 2011}}</ref>
<math>R = 1.22 * {\gamma \over {NA_{obj} + NA_{cond}}}</math>.<ref name=pom>{{cite web |url=http://www.life.umd.edu/CBMG/faculty/wolniak/wolniakmicro.html |title=Principles of Microscopy  |author= |date= |work= |publisher= |accessdate=21 January 2011}}</ref>
<br>
<br>
Where:
Where:
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*<math>NA_{obj}</math> = numerical aperture of the objective; typically 0.25 - 1.4, >1.0 is oil immersion, it is usu. inscribed on the lens itself.
*<math>NA_{obj}</math> = numerical aperture of the objective; typically 0.25 - 1.4, >1.0 is oil immersion, it is usu. inscribed on the lens itself.
*<math>NA_{cond}</math> = numerical aperture of the condenser.
*<math>NA_{cond}</math> = numerical aperture of the condenser.
*<math>gamma</math> = wave length of light.
*<math>\gamma</math> = wave length of light.


It follows from the above equation that, closure of the condenser diaphragm results in a loss of resolution, i.e. R is larger.<ref name=pom/><br>
It follows from the above equation that, closure of the condenser diaphragm results in a loss of resolution, i.e. R is larger.<ref name=pom/><br>


Stated differently:<ref>URL: [http://www.microbehunter.com/2008/12/18/the-condenser-aperture-diaphragm/ http://www.microbehunter.com/2008/12/18/the-condenser-aperture-diaphragm/]. Accessed on: 21 January 2011.</ref><ref>URL: [http://www.grayfieldoptical.com/depth_of_fieldfocus.html http://www.grayfieldoptical.com/depth_of_fieldfocus.html]. Accessed on: 27 May 2011.</ref>
Stated differently:<ref>URL: [http://www.microbehunter.com/2008/12/18/the-condenser-aperture-diaphragm/ http://www.microbehunter.com/2008/12/18/the-condenser-aperture-diaphragm/]. Accessed on: 21 January 2011.</ref><ref name=grayfield_dof>URL: [http://www.grayfieldoptical.com/depth_of_fieldfocus.html http://www.grayfieldoptical.com/depth_of_fieldfocus.html]. Accessed on: 27 May 2011.</ref>
*Opening the condenser --> increases resolution & brightness -- but -- decreases depth of field (DOF) & contrast.
*Opening the condenser --> increases resolution & brightness -- but -- decreases depth of field (DOF) & contrast.
*Closing the condenser --> increases DOF & contrast -- but -- decreases resolution & brightness.
*Closing the condenser --> increases DOF & contrast -- but -- decreases resolution & brightness.
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====Numerical aperture====
====Numerical aperture====
If one substitutes the above into the equation at the top:<br>
If one substitutes the above into the equation at the top:<br>
<math>R = 1.22 * {gamma \over ( D/2*f )}</math>.
<math>R = 1.22 * {\gamma \over ( D/2*f )}</math>.


Notes:
Notes:
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***Condenser diaphragm --> incr. contrast for resolution ---- large dia. good resol. bad contrast?
***Condenser diaphragm --> incr. contrast for resolution ---- large dia. good resol. bad contrast?
****Field aperature diaphragm --> optical illumination.
****Field aperature diaphragm --> optical illumination.
==Depth of field==
*Abbreviated ''DOF''.
*It depends on the aperature (small is better).<ref name=grayfield_dof>URL: [http://www.grayfieldoptical.com/depth_of_fieldfocus.html http://www.grayfieldoptical.com/depth_of_fieldfocus.html]. Accessed on: 27 May 2011.</ref>
**Inverse relationship with resolution and brightness.
**Related to contrast.
<math>DOF = { \lambda_o n \over NA^2}+{ n \over M \cdot NA } e
</math>.<ref>URL: [http://www.microscopyu.com/articles/formulas/formulasfielddepth.html http://www.microscopyu.com/articles/formulas/formulasfielddepth.html]. Accessed on: 27 May 2011.</ref>


==Kohler illumination==
==Kohler illumination==
48,868

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