Difference between revisions of "Bacteria"

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==Actinomycetes==
==Actinomycetes==
===General===
===General===
*IUD needs to be removed if found on a pap test<ref name=Ref_WMSP446>{{Ref WMSP|446}}</ref> - see ''[[Gynecologic cytopathology#Actinomycetes|gynecologic cytopathology]]''.
*[[IUD]] needs to be removed if found on a pap test<ref name=Ref_WMSP446>{{Ref WMSP|446}}</ref> - see ''[[Gynecologic cytopathology#Actinomycetes|gynecologic cytopathology]]''.
*Gram-positive branching rods.
*[[Gram]]-positive branching rods.
*Common in the tonsils.
*Common in the tonsils.
*Part of the large [[Actinobacteria]] group.<ref name=pmid17804669>{{Cite journal  | last1 = Ventura | first1 = M. | last2 = Canchaya | first2 = C. | last3 = Tauch | first3 = A. | last4 = Chandra | first4 = G. | last5 = Fitzgerald | first5 = GF. | last6 = Chater | first6 = KF. | last7 = van Sinderen | first7 = D. | title = Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum. | journal = Microbiol Mol Biol Rev | volume = 71 | issue = 3 | pages = 495-548 | month = Sep | year = 2007 | doi = 10.1128/MMBR.00005-07 | PMID = 17804669 | PMC = 2168647}}</ref>
*Part of the large [[Actinobacteria]] group.<ref name=pmid17804669>{{Cite journal  | last1 = Ventura | first1 = M. | last2 = Canchaya | first2 = C. | last3 = Tauch | first3 = A. | last4 = Chandra | first4 = G. | last5 = Fitzgerald | first5 = GF. | last6 = Chater | first6 = KF. | last7 = van Sinderen | first7 = D. | title = Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum. | journal = Microbiol Mol Biol Rev | volume = 71 | issue = 3 | pages = 495-548 | month = Sep | year = 2007 | doi = 10.1128/MMBR.00005-07 | PMID = 17804669 | PMC = 2168647}}</ref>
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Notes:
Notes:
*''Mycete'' = fungus; these organisms have a fungus-like appearance.
*''Mycete'' = fungus; these organisms have a fungus-like appearance.
** Also called ''pseudomycosis''.


===Gross===
===Gross===
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*Sulfur granule may be seen grossly - yellow.<ref name=medsc>URL: [http://pathmicro.med.sc.edu/mycology/mycology-2.htm http://pathmicro.med.sc.edu/mycology/mycology-2.htm]. Accessed on: 14 September 2011.</ref>
*Sulfur granule may be seen grossly - yellow.<ref name=medsc>URL: [http://pathmicro.med.sc.edu/mycology/mycology-2.htm http://pathmicro.med.sc.edu/mycology/mycology-2.htm]. Accessed on: 14 September 2011.</ref>


Images:
====Images====
*[http://commons.wikimedia.org/wiki/File:Actinomyces_-_high_mag.jpg Actinomyces - high mag. (WC)].
<gallery>
*[http://commons.wikimedia.org/wiki/File:Actinomyces_-_very_high_mag.jpg Actinomyces - very high mag. (WC)].
Image:Actinomyces_-_high_mag.jpg | Actinomyces - high mag. (WC)
Image:Actinomyces_-_very_high_mag.jpg | Actinomyces - very high mag. (WC)
File:Actinomycetes_CNS_HE.jpg | Purulent encephalitis with actinomyces in HE. (WC/jensflorian)
File:Actinomycetes_CNS_grocott.jpg | Purulent encephalitis with actinomyces in Grocott. (WC/jensflorian)
</gallery>
*[http://pathology.class.kmu.edu.tw/ch05/Slide42.htm Actinobacteria (kmu.edu.tw)].
*[http://pathology.class.kmu.edu.tw/ch05/Slide42.htm Actinobacteria (kmu.edu.tw)].


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*PAS +ve.  
*PAS +ve.  
**May be confused with a fungus!
**May be confused with a fungus!
*Grocott +ve.


==Helicobacter pylori==
==Helicobacter pylori==
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==Clostridium difficile==
==Clostridium difficile==
*Commonly ''C. difficile''.
*Commonly ''C. difficile''.
*Classic cause of [[pseudomembranous colitis]].


===General===
===General===
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===Stains===
===Stains===
*AFB +ve.
*AFB +ve.
Note:
*[[Fite stain]] considered the preferred stain for MAC.<ref name=pmid21327589>{{cite journal |authors=Ilyas S, Youssef D, Chaudhary H, Al-Abbadi MA |title=Myocbacterium-avium intracellulare associated inflammatory pseudotumor of the anterior nasal cavity |journal=Head Neck Pathol |volume=5 |issue=3 |pages=296–301 |date=September 2011 |pmid=21327589 |pmc=3173547 |doi=10.1007/s12105-011-0248-0 |url=}}</ref>


==Coxiella burnetii==
==Coxiella burnetii==
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*Similar to pyogenic granuloma - ''see [[pyogenic granuloma]]''.
*Similar to pyogenic granuloma - ''see [[pyogenic granuloma]]''.


Features - ''cat-scratch disease'':
Features - ''[[cat-scratch disease]]'':
*Stellate granulomas.
*Stellate granulomas.


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Image:
Image:
*[http://commons.wikimedia.org/wiki/File:Blood_culture_negative_endocarditis.jpg Bartonella henselae (WC)].
*[http://commons.wikimedia.org/wiki/File:Blood_culture_negative_endocarditis.jpg Bartonella henselae (WC)].
==Lactobacillus==
===General===
*Gram positive bacilli.
*Normal vaginal flora.
===Microscopic===
Features:
*Slender bacilli.
<gallery>
Image:Lactobacillus_sp_01.png | Lactobacilli. (WC)
</gallery>
==Pseudomonas==
===General===
*Gram-negative bacteria.
*Common pathogenic ''Pseudomonas aeruginosa''.
*Community-acquired [[bronchopneumonia]].
**May be seen under nail - causes green nails.<ref name=pmid23064921>{{Cite journal  | last1 = Barankin | first1 = B. | last2 = Levy | first2 = J. | title = Dermacase. Can you identify this condition? Pseudomonas aeruginosa infection. | journal = Can Fam Physician | volume = 58 | issue = 10 | pages = 1103-4 | month = Oct | year = 2012 | doi =  | PMID = 23064921 }}</ref><ref>{{Cite journal  | last1 = Hengge | first1 = UR. | last2 = Bardeli | first2 = V. | title = Images in clinical medicine. Green nails. | journal = N Engl J Med | volume = 360 | issue = 11 | pages = 1125 | month = Mar | year = 2009 | doi = 10.1056/NEJMicm0706497 | PMID = 19279344 }}</ref>
===Gross===
*Green [[nail]].
Images:
*[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3470509/figure/f1-0581103/ Green nail (nih.gov)].<ref name=pmid23064921/>
==Sarcina==
{{Main|Sarcina}}


==See also==
==See also==
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