Difference between revisions of "DNA sequence comparison"
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'''DNA sequence comparison''' is component of [[molecular pathology]]. | '''DNA sequence comparison''' is component of [[molecular pathology]]. | ||
==Nomenclature== | |||
This is still somewhat in flux.<ref name=pmid17251329>{{cite journal |author=Ogino S, Gulley ML, den Dunnen JT, Wilson RB |title=Standard mutation nomenclature in molecular diagnostics: practical and educational challenges |journal=J Mol Diagn |volume=9 |issue=1 |pages=1–6 |year=2007 |month=February |pmid=17251329 |pmc=1867422 |doi=10.2353/jmoldx.2007.060081 |url=http://moldiag.highwire.org/cgi/content/full/9/1/1#B6}}</ref> | |||
==Basic local alignment search tool== | ==Basic local alignment search tool== | ||
Revision as of 15:58, 5 May 2011
DNA sequence comparison is component of molecular pathology.
Nomenclature
This is still somewhat in flux.[1]
Basic local alignment search tool
- AKA BLAST.
Using BLAST
- Go to BLAST web site ( http://blast.ncbi.nlm.nih.gov/Blast.cgi ).
- Enter sequence.
- Enter consensus sequence (can be found with OMIM).
- Hit enter.
See also
External links
- Artemis Comparison Tool (ACT) - a GPL'ed sequence comparison tool (sanger.ac.uk).
- List of sequence alignment software (WP).
- BLAST - sequence comparison tool (ncbi.nlm.nih.gov).
- ↑ Ogino S, Gulley ML, den Dunnen JT, Wilson RB (February 2007). "Standard mutation nomenclature in molecular diagnostics: practical and educational challenges". J Mol Diagn 9 (1): 1–6. doi:10.2353/jmoldx.2007.060081. PMC 1867422. PMID 17251329. http://moldiag.highwire.org/cgi/content/full/9/1/1#B6.