Difference between revisions of "Informatics"

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733 bytes added ,  13:50, 16 October 2019
(→‎Whole-Slide Images: SlideJ for ImageJ)
(→‎Open source: Ilastik)
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[https://computationalpathologygroup.github.io/ASAP/ ASAP] is an open-source whole-slide image viewer.
[https://computationalpathologygroup.github.io/ASAP/ ASAP] is an open-source whole-slide image viewer.
[https://www.ilastik.org/ Ilastik - interactive learning and segmentation toolkit] is an open source tool to perform segmentation and classification of images. Cureently it does not support full virtual slides.<ref>{{Cite journal  | last1 = Berg | first1 = S. | last2 = Kutra | first2 = D. | last3 = Kroeger | first3 = T. | last4 = Straehle | first4 = CN. | last5 = Kausler | first5 = BX. | last6 = Haubold | first6 = C. | last7 = Schiegg | first7 = M. | last8 = Ales | first8 = J. | last9 = Beier | first9 = T. | title = ilastik: interactive machine learning for (bio)image analysis. | journal = Nat Methods | volume =  | issue =  | pages =  | month = Sep | year = 2019 | doi = 10.1038/s41592-019-0582-9 | PMID = 31570887 }}</ref>


==Whole-Slide Images==
==Whole-Slide Images==
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